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SRX20561501: Single cell sequencing of Kanda river: in P06
1 ILLUMINA (Illumina HiSeq X) run: 322,750 spots, 97.5M bases, 32.5Mb downloads

Design: single amplified genomes
Submitted by: Waseda University
Study: Metagenomic profiling of antibiotic resistance genes and bacterial community along an urban river, the Kanda River in Japan
show Abstracthide Abstract
As emerging containments, antibiotics resistance genes (ARGs) in urban rivers threaten ecological and public health. To gain insights into ARGs dissemination, ARG resistomes and their association in the riverine ecosystems, ARG profiles and microbial distribution characteristics in the Kanda river were investigated via metagenomic sequencing and 16S rRNA sequencing, respectively.
Sample: MISAG Single Amplified Genome sample from Kanda river
SAMN35442253 • SRS17866463 • All experiments • All runs
Organism: bacterium
Library:
Name: SAG_0396
Instrument: Illumina HiSeq X
Strategy: WGA
Source: GENOMIC SINGLE CELL
Selection: PCR
Layout: PAIRED
Runs: 1 run, 322,750 spots, 97.5M bases, 32.5Mb
Run# of Spots# of BasesSizePublished
SRR24788736322,75097.5M32.5Mb2024-10-18

ID:
27988501

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